Quick Comparison
| Magnesium L-Threonate | Melatonin | |
|---|---|---|
| Half-Life | 2-3 hours (threonate carrier), but brain magnesium levels increase cumulatively | 40-60 minutes |
| Typical Dosage | Standard: 1500-2000 mg Magnesium L-Threonate daily (providing 144 mg elemental magnesium). Often split into a daytime dose and a pre-bed dose. The Magtein brand uses 2000 mg daily (667 mg three times). | Optimal sleep dose: 0.3-1 mg taken 30-60 minutes before bed. Commercial doses of 3-10 mg are higher than needed and can cause next-day grogginess. Extended-release forms help with sleep maintenance (waking in the middle of the night). |
| Administration | Oral (capsules, powder). The L-threonate form is specifically chosen for brain penetration. | Oral (tablets, capsules, gummies, sublingual). Sublingual provides faster onset. |
| Research Papers | 10 papers | 10 papers |
| Categories |
Mechanism of Action
Magnesium L-Threonate
The L-threonate carrier forms stable complexes with magnesium and transports it across the blood-brain barrier via specific transporters more effectively than inorganic magnesium salts or other chelated forms. Once in the brain, magnesium acts as a voltage-dependent blocker of the NMDA receptor channel at the physiological magnesium binding site within the ion pore, preventing excessive calcium influx and glutamate-mediated excitotoxicity. Magnesium also serves as a cofactor for over 300 enzymes including those involved in neurotransmitter synthesis (tyrosine hydroxylase, glutamic acid decarboxylase), ATP production (creatine kinase, pyruvate kinase), and DNA/RNA polymerase. Elevated brain magnesium enhances synaptic density and plasticity in the hippocampus and prefrontal cortex, likely through CREB-mediated gene expression and increased density of postsynaptic AMPA receptors.
Melatonin
Melatonin binds to G-protein-coupled MT1 and MT2 receptors, which are densely expressed in the suprachiasmatic nucleus (SCN) of the hypothalamus—the brain's master circadian pacemaker. MT1 activation couples to Gi/o proteins, inhibiting adenylyl cyclase and reducing cAMP, which suppresses SCN neuronal firing and promotes sleepiness. MT2 activation modulates cGMP signaling and phase-shifts the circadian rhythm (useful for jet lag and shift work). Melatonin also has direct antioxidant properties, scavenging hydroxyl and peroxyl radicals in mitochondria and upregulating antioxidant enzymes like glutathione peroxidase. It supports immune function through modulation of T-cell cytokine production and may act at MT3 (quinone reductase 2) binding sites. Low doses are often more effective because they mimic physiological nighttime levels.
Risks & Safety
Magnesium L-Threonate
Common
Drowsiness (often desired for sleep), mild headache initially, gastrointestinal discomfort.
Serious
None documented at standard doses. Magnesium toxicity is not a concern with oral supplementation in people with normal kidney function.
Rare
Diarrhea (less common than with other magnesium forms).
Melatonin
Common
Morning grogginess (especially at high doses), vivid dreams, mild headache.
Serious
May worsen symptoms in people with autoimmune conditions. Interacts with blood thinners, diabetes medications, and immunosuppressants.
Rare
Depression, daytime sleepiness, reduced sex drive with chronic high-dose use.
Full Profiles
Magnesium L-Threonate →
A form of magnesium specifically designed to cross the blood-brain barrier and increase brain magnesium levels. Developed at MIT, it is the only magnesium form clinically shown to raise CSF magnesium concentrations. Brain magnesium is critical for synaptic plasticity, and deficiency (common in modern diets) impairs learning, memory, and sleep quality. Sold under the brand name Magtein.
Melatonin →
A hormone produced by the pineal gland that regulates the sleep-wake cycle. Exogenous melatonin is the most widely used sleep supplement worldwide. For nootropic purposes, sleep is foundational — poor sleep destroys cognitive performance more than any supplement can compensate for. Low doses (0.3-1 mg) are often more effective than the common 5-10 mg doses sold commercially.